CDS

Accession Number TCMCG083C08478
gbkey CDS
Protein Id KMZ64378.1
Location complement(join(127707..128562,128635..128804))
Organism Zostera marina
locus_tag ZOSMA_373G00260

Protein

Length 341aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA41721, BioSample:SAMN00991190
db_source LFYR01001161.1
Definition F-box protein SKP2A [Zostera marina]
Locus_tag ZOSMA_373G00260

EGGNOG-MAPPER Annotation

COG_category S
Description Leucine-rich repeat - CC (cysteine-containing) subfamily
KEGG_TC -
KEGG_Module M00381        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K03875        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04068        [VIEW IN KEGG]
ko04110        [VIEW IN KEGG]
ko04120        [VIEW IN KEGG]
ko04150        [VIEW IN KEGG]
ko05168        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
ko05200        [VIEW IN KEGG]
ko05203        [VIEW IN KEGG]
ko05222        [VIEW IN KEGG]
map04068        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04120        [VIEW IN KEGG]
map04150        [VIEW IN KEGG]
map05168        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
map05200        [VIEW IN KEGG]
map05203        [VIEW IN KEGG]
map05222        [VIEW IN KEGG]
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010101        [VIEW IN EMBL-EBI]
GO:0010102        [VIEW IN EMBL-EBI]
GO:0010286        [VIEW IN EMBL-EBI]
GO:0010311        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019005        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031146        [VIEW IN EMBL-EBI]
GO:0031461        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048527        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048581        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051093        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051241        [VIEW IN EMBL-EBI]
GO:0051302        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051781        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071365        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901332        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000023        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000069        [VIEW IN EMBL-EBI]
GO:2000280        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCAAGACAAATCACAGGAGGAGGAAGAGGGTGGAAAGACCTCCCGGCGGAGCTAATCCAGAGTATTCTCGTTTTCTCAGACGAGAAAGCAGCCATCACCGTCTCCGGTGTCTGCACCGATTGGAGAATCGCGGTTACATCAACCACCACACATCTCTCTCTGTCATGGTGCAAGAATCACATGAACGATCTGTTGATTACGATCTCCCAGAGTTTCATACACCTGAAAGTGCTTAGCCTCCGGCAAACTAAGCCTCAGCTGGAAGACACCGGCGTCGAGGCGGTGGCCCTTAACTGCCACGACCTGCAAGAATTAGACATCAGCAAGAGTATCAATCTCACCGACCGTTCGTTGCTCGCTTTGGCACATGGATGTCCCAAACTCAGCAAACTAGTCGTCTCCGGTTGCACCACCTTCACCGACTCCTCCCTCGCTTATCTCACTGGAGTGTGCACCGGGATGAGGCATCTTAACCTCTGCGGTTGCGGCCGGGCGGTGACCGATCGGGCTTTGCGGGCTATTGCGAGAAACTGTCCGGAGCTCCAGGTTTTGAACATTGGGTGGTGCGAGGAGGTAAGTGACCAGGGTGTGACGAGTCTTGCCATTGGTTGCCCGGATCTCCGATCACTTGACCTCTGCGCATGCGTGCTCATAACAGATGAGAGTGTGGTGGCTCTGGCAAATGGGTGCCGGCGTCTGAAATCGCTTGATCTTTACTACTGCCGGAACATAACTGACAGAGCGATGTACTGCTTGGCAAATAGTGGCGGGCGTTGTAGGATGAAACGGTCGGTGGTGTGCAGATGCAACGGATGTTGCTGTGACGAGGAAGAAGGGTTGGAGAGCTTGAATATAAGCCAATGCACTGCACTTACACCTCCGGCGGTACAGGCGGTTTGTGACTCATTCCCTGCACTTCATACTTGCTCAGACCGGCATTCTCTTAGCATCAGTGGGTGTCTCAGTCTGGCGTCTGTTCACTGTGCTTGCTCTGGTGAGGCAAACCACGGCCGTGGATTTTGA
Protein:  
MPRQITGGGRGWKDLPAELIQSILVFSDEKAAITVSGVCTDWRIAVTSTTTHLSLSWCKNHMNDLLITISQSFIHLKVLSLRQTKPQLEDTGVEAVALNCHDLQELDISKSINLTDRSLLALAHGCPKLSKLVVSGCTTFTDSSLAYLTGVCTGMRHLNLCGCGRAVTDRALRAIARNCPELQVLNIGWCEEVSDQGVTSLAIGCPDLRSLDLCACVLITDESVVALANGCRRLKSLDLYYCRNITDRAMYCLANSGGRCRMKRSVVCRCNGCCCDEEEGLESLNISQCTALTPPAVQAVCDSFPALHTCSDRHSLSISGCLSLASVHCACSGEANHGRGF